Races of Puccinia graminis f. sp. tritici with Combined Virulence
to Sr13 and Sr9e in a Field Stem Rust Screening Nursery in Ethiopia
P. D. Olivera, Department of Plant Pathology, University of Minnesota, St. Paul, MN 55108; Y. Jin and M. Rouse, United States
Department of Agriculture–Agricultural Research Service, Cereal Disease Laboratory, St. Paul, MN 55108; A. Badebo, Ethiopian
Institute of Agricultural Research, Debre Zeit, Ethiopia; T. Fetch, Jr., Cereal Research Center, Agriculture and Agri-Food Canada,
Winnipeg, MB R3T 2M9, Canada; and R. P. Singh and A. Yahyaoui, International Maize and Wheat Improvement Center, El Batan,
Mexico, CP 56130
Abstract
Olivera, P. D., Jin, Y., Rouse, M., Badebo, A., Fetch, T., Jr., Singh, R. P., and Yahyaoui, A. 2012. Races of Puccinia graminis f. sp. tritici with combined virulence to Sr13 and Sr9e in a field stem rust screening nursery in Ethiopia. Plant Dis. 96:623-628.
North American durum lines, selected for resistance to TTKSK (Ug99)
and related races of Puccinia graminis f. sp. tritici in Kenya, became
susceptible in Debre Zeit, Ethiopia, suggesting the presence of stem
rust races that were virulent to the TTKSK-effective genes in durum.
The objective of this study was to characterize races of P. graminis f.
sp. tritici present in the Debre Zeit, Ethiopia stem rust nursery. Three
races of P. graminis f. sp. tritici were identified from 34 isolates:
JRCQC, TRTTF, and TTKSK. Both races JRCQC and TRTTF possess
virulence on stem rust resistance genes Sr13 and Sr9e, which may
explain why many TTKSK-resistant durum lines tested in Kenya became susceptible in Debre Zeit. The Sr9e-Sr13 virulence combination
is of particular concern because these two genes constitute major
components of stem rust resistance in North American durum cultivars.
In addition to Sr9e and Sr13 virulence, race TRTTF is virulent to at
least three stem rust resistance genes that are effective to race TTKSK,
including Sr36, SrTmp, and resistance conferred by the 1AL.1RS rye
translocation. Race TRTTF is the first known race with virulence to the
stem rust resistance carried by the 1AL.1RS translocation, which
represents one of the few effective genes against TTKSK in winter
wheat cultivars in the United States. Durum entries exhibiting resistant
to moderately susceptible infection response at the Debre Zeit nursery
in 2009 were evaluated for reaction to races JRCQC, TRTTF, and
TTKSK at the seedling stage. In all, 47 entries were resistant to the
three races evaluated at the seedling stage, whereas 26 entries exhibited
a susceptible reaction. These results suggest the presence of both major
and adult plant resistance genes, which would be useful in durumwheat-breeding programs. A thorough survey of virulence in the
population of P. graminis f. sp. tritici in Ethiopia will allow characterization of the geographic distribution of the races identified in the Debre Zeit field nursery.
Stem rust, caused by Puccinia graminis f. sp. tritici, is one of the
most destructive diseases of bread wheat (Triticum aestivum), durum wheat (T. turgidum subsp. durum), and barley (Hordeum vulgare). Races that recently emerged in eastern Africa (TTKSK
[Ug99] and its variants) possess broad virulence to wheat cultivars
worldwide, and only a few genes in adapted cultivars are effective
against these races (7,8,21). Durum wheat in North America generally has a higher frequency of resistance to race TTKSK than common wheat based on field evaluations conducted in Njoro, Kenya
in 2005 and 2006 (R. Singh and Y. Jin, unpublished). Pozniak et al.
(14) described that over 80% of the durum varieties and breeding
lines from breeding programs in the United States and Canada
evaluated in a field trial in Njoro exhibited a moderately resistant
or resistant response to stem rust. Singh et al. (18) also reported
that durum lines from Egypt and the International Maize and
Wheat Improvement Center (CIMMYT) exhibited a high level of
resistance to races TTKSK and TTKST in the Njoro’s field nursery.
However, when durum lines from the United States and CIMMYT
were selected for resistance in Kenya and subsequently were
evaluated in Debre Zeit, Ethiopia, many became susceptible to
stem rust (R. Singh and Y. Jin, unpublished). Thus, we hypothesized that races of P. graminis f. sp. tritici in the Debre Zeit nursery
possess virulence that overcomes the TTKSK resistance in North
American durum germplasm. The objective of this study was to
identify the race or races of P. graminis f. sp. tritici present in the
Debre Zeit, Ethiopia nursery that are virulent on durum lines with
TTKSK resistance.
Corresponding author: Y. Jin, E-mail: yue.jin@ars.usda.gov
Accepted for publication 10 November 2011.
http://dx.doi.org/10.1094 / PDIS-09-11-0793
This article is in the public domain and not copyrightable. It may be freely
reprinted with customary crediting of the source. The American Phytopathological Society, 2012.
Materials and Methods
Stem rust nursery. The 2009 durum stem rust field nursery was
established by the Ethiopian Institute of Agricultural Research at
the Debre Zeit Research Center in Ethiopia. The nursery site was
located at 08°46′N, 39°00′E, and 1,900 m in elevation. Entries
were planted in double 1-m-row plots on 15 July 2009. Wheat ‘Red
Bobs’ (CItr 6255) was included at an interval of 50 lines as a susceptible control. Continuous rows of stem rust spreader (mixture of
susceptible cultivars) were planted perpendicular to all entries to
facilitate inoculum build-up and uniform dissemination. The
spreader rows were planted the same day as the wheat entries and
were artificially inoculated by needle injection three times at a
weekly interval, starting at stem elongation (stage = Zadoks 31)
(23). Urediniospores were suspended in distilled water plus one
drop of Tween 20 per 0.5 liters of suspension, and delivered with a
hypodermic syringe into the stem tissue. Inoculum was composed
of race TTKSK and a bulk of Ethiopian isolates (with unknown
race identities) at a ratio of 50/50. Race TTKSK was originally
collected from wheat ‘PBW343’ (carrying Sr31) at Debre Zeit, and
the bulk of Ethiopian isolates was collected from durum lines at the
Debre Zeit Research Center.
Sample collection and storage. Forty-one samples of infected
stems were collected from durum and common wheat lines with
known Sr genes in the stem rust field nursery in 2009. Each sample
consisted of 10 to 15 pieces of stem tissue of about 10 cm in length
bearing moderately susceptible to susceptible pustules. Stem and
leaf sheath tissue were kept in glassine bags and air dried for 2
days at room temperature in the dark. Dried samples were mailed
Plant Disease / May 2012
623
to the United States using an international express courier service
with a transit time of 5 days. Shipping protocol was followed according to United States Department of Agriculture (USDA) Animal and Plant Health Inspection Service permit conditions for
handling international cultures of P. graminis f. sp. tritici. Upon
arrival at the Cereal Disease Laboratory, samples were stored in a –
80°C freezer. In December, urediniospores from each stem sample
were collected into three to four gelatin capsules (size 00) and
stored at –80°C.
Race identification. The North American stem rust differential
set (15,16) that was modified to further delineate races in the
TTKS race group (9) was used for race identification. One capsule
per sample was removed from the –80°C freezer and exposed to a
heat-shock treatment (water bath at 45°C for 15 min), then placed
in a rehydration chamber (80% relative humidity maintained by a
KOH solution) for a period of 4 h (9). Five seedlings from each of
the 20 differential lines were inoculated with a bulk collection of
spores on fully expanded primary leaves at 8 to 9 days after planting. Experimental procedures for inoculation, incubation, and disease assessment were done as described by Jin et al. (8). Singlepustule isolates were derived from individual plants after preliminary evaluation on the differential lines. Six to eight pustules were
isolated from each original collection. Incubation and collection of
urediniospores from each single pustule was done as described by
Jin et al. (9). The pure cultures derived from single-pustule inoculation were increased on ‘McNair 701’ wheat (CItr 15288) and
stored at –80°C. Each single-pustule isolate was evaluated two to
three times on differential lines before a race was designated. Race
designation was done based on the letter code proposed by Roelfs
and Martens (16). Representative isolates from each race were
further characterized on 17 additional monogenic lines carrying the
following genes: Sr22, Sr25, Sr26, Sr27, Sr32, Sr33, Sr35, Sr37,
Sr39, Sr40, Sr42, Sr44, Sr46, Sr47, Sr50, SrSatu, and the 1A.1R
rye translocation. Cultivars and lines carrying Sr13 and Sr9e alone
or in combination and both resistant (Iumillo [PI 210973]) and
susceptible (Rusty [PI 639869]) checks were also included in the
evaluation of each isolate.
Seedling evaluation of wheat germplasm. One thousand durum entries deposited at the USDA Agricultural Research Service,
National Small Grain Collection (Aberdeen, ID) were evaluated for
resistance in field test at the 2009 durum stem rust field nursery in
Debre Zeit. Disease assessment was done at the soft-dough stage
of plant growth. Plants were evaluated for their infection response
(pustule type and size) (17) and stem rust severity following the
modified Cobb scale (13). In all, 137 durum wheat lines character-
ized as resistant with a maximum 30% stem rust severity and maximum moderately susceptible infection response were evaluated at
the seedling stage with P. graminis f. sp. tritici races identified
from this nursery following procedures described above. Seedling
evaluation was repeated once.
Results and Discussion
We obtained 34 single-pustule isolates from the 41 samples collected in 2009 from the Debre Zeit nursery. Three races of P.
graminis f. sp. tritici were identified: JRCQC, TRTTF, and TTKSK
(Table 1). The race most frequently observed was TTKSK (18
isolates), followed by JRCQC (12 isolates) and TRTTF (4 isolates).
The high frequency of race TTKSK was likely due to artificial
inoculation of P. graminis f. sp. tritici collected from PBW 343 in
the 2009 Debre Zeit field nursery. The virulence profile of race
TTKSK from Debre Zeit was identical to that of race TTKSK isolates found in Kenya (9,10).
Race JRCQC produced high infection types (ITs) on differential
lines carrying Sr6, Sr9a, Sr9d, Sr9e, Sr9g, Sr11, Sr13/17, Sr21, and
SrMcN (Table 1). Race JRCQC produced a high IT on differential
line Combination VII, which carries Sr13 in addition to Sr17 and
was virulent on other Sr13-lines (Table 2). Thus, this race possesses relatively rare virulence to both Sr9e and Sr13, a combination believed to be the main component of stem rust resistance in
contemporary North American durum cultivars (11). Race JRCQC
produced an IT = X- on W2691Sr10 (tester for Sr10). W2691Sr10
generally produces IT = 0; to ;1 when inoculated with avirulent
North American stem rust isolates, and IT = X is infrequent except
for a few isolates from the Pacific Northwest (Y. Jin, unpublished).
It is not known, however, whether the “X” type was due to Sr10 or
a different gene in the W2691Sr10 background. Race JRCQC was
avirulent to additional stem rust resistance genes tested in this
study, except presumably Sr42 in Norin 40 (Table 2).
Race TRTTF was first identified from a stem rust collection
from Yemen in 2006 (Y. Jin and A. Yahyaoui, unpublished), and
was further isolated from stem rust collections in Ethiopia and
Yemen in subsequent years (T. Fetch, unpublished). Race TRTTF
is virulent on most of the stem rust resistance genes in the differential set, including Sr9e (Table 1). Virulence on Sr13 was determined based on high IT (IT 3+) on Combination VII, which carries
Sr13 in addition to Sr17 (Table 1). Virulence on Sr9e and Sr13 was
also confirmed in monogenic lines Vernal (Sr9e) and Khapstein/9*LMPG (Sr13), respectively (Table 2). However, the low ITs
observed on K253/3*Steinwedel/8*LMPG (Sr9e) and Leeds (Sr9e
+ Sr13) (Table 2) indicate that these lines may carry an additional
Table 1. Infection types (ITs) observed on stem rust differentials using races JRCQC, TRTTF, and TTKSK of Puccinia graminis f. sp. tritici collected from
the 2009 Debre Zeit (Ethiopia) field nurserya
Gene
Line
Sr5
Sr21
Sr9e
Sr7b
Sr11
Sr6
Sr8a
Sr9g
Sr36
Sr9b
Sr30
Sr17 (+Sr13)
Sr9a
Sr9d
Sr10
SrTmp
Sr24
Sr31
Sr38
McN
a
ISr5-Ra
CnS_T_mono_deriv
Vernstein
ISr7b-Ra
ISr11-Ra
ISr6-Ra
ISr8a-Ra
CnSr9g
W2691SrTt-1
W2691Sr9b
BtSr30Wst
Combination VII
ISr9a-Ra
ISr9d-Ra
W2691Sr10
CnsSrTmp
LcSr24Ag
Sr31/6*LMPG
Trident
McNair 701
JRCQC (09ETH08-3)
;1
4
4
2
4
3+
22+
4
0
2+
223
3+
4
1+3;
222;1
4
TRTTF (09ETH06-1)
4
4
3+
3+
4
3+
2
4
3+
4
4
3+
4
4
4
4
2
24
4
TTKSK (09ETH05-3)
4
3+
4
4
3+
4
4
4
0
4
4
22+
3+
4
4
2+
24
4
4
ITs were accessed on seedlings at 14 days post inoculation using a 0-to-4 scale according to Stakman et al. (19), where ITs of 0, ;, 1, 2, or combinations are
considered to be low ITs and ITs of 3 or higher are considered to be high. “N” or “C” denotes excessive necrosis or chlorosis, respectively.
624
Plant Disease / Vol. 96 No. 5
resistance gene or genes that are effective against race TRTTF.
Race TRTTF has a virulence profile similar to race RRTTF (avirulent on Sr9e), identified from stem rust collections in Ethiopia and
Yemen in 2007 (4) and Pakistan in 2009 (6). Interestingly, both
races have a uredinial morphology that is distinct from other common stem rust isolates in that the epidermal tissue over the uredinia
has a delayed breakage and the color of uredinia is darker than
normal (Fig. 1).
In addition to virulence to Sr13 and Sr9e, race TRTTF exhibited
a high IT (IT 3) to stem rust resistance conferred by the 1AL.1RS
translocation (Table 2). This is the first known race with virulence
to the stem rust resistance gene carried by this rye translocation,
which represents one of the few effective genes to Ug99 in winter
wheat cultivars in the United States (7). Race TRTTF, in combination with TTKSK, differentiates the stem rust resistance gene on
1AL.1RS from other stem rust resistance genes present on 1RS;
namely, Sr31 and Sr50 (3,12). Additional data are needed to determine the genetic relationship between 1A.1R resistance and both
Sr31 and Sr50. In the United States, current bread wheat breeding
lines and cultivars with resistance to race TTKSK possess resistance genes including Sr24, Sr36, SrTmp, and resistance on the
1A.1R translocation (7). Though race TRTTF is avirulent to Sr31,
Table 2. Infection types (ITs) observed on additional resistant lines using races JRCQC and TRTTF of Puccinia graminis f. sp. tritici identified from the
2009 Debre Zeit (Ethiopia) field nurserya
Gene
Resistant check
Susceptible check
Sr13
Sr9e
Sr9e
Sr13 + Sr9e
Sr22
Sr25
Sr26
Sr27
Sr32
Sr33
Sr35
Sr37
Sr39
Sr40
Sr42
Sr44
Sr46
Sr47
SrSatu
1A.1R
Sr50
a
Line
Iumillo
Rusty
Khapstein/9*LMPG
Vernal
K253/3*Steinwedel/8*LMPG
Leeds
SwSr22T.B.
LcSr25Ars
Eagle
WRT 238-5
ER 5155
Tetra Canthatch/Ae. Squarrosa
Mq(2)5*G2919
W3563
RL6082
RL6088
Norin 40
TAF 2
AUS 18913
DAS15
Satu
TAM 107
Fed*3/Gabo*51BL.1RS-1-1
JRCQC (09ETH08-3)
;N
3+
3
3+
4
4
22+
2
;
2
;2=
0
31;
0;
233+
;N1
;1
;2=
0;
22-;
TRTTF (09ETH06-1)
11+;N
4
3+
3
2+
;
22+3222+
2
0
13+;
22
4
3+;N1
2-;
20;
3
;1-
ITs observed on seedlings at 14 days post inoculation using a 0-to-4 scale according to Stakman et al. (19), where ITs of 0, ;, 1, 2, or combinations are
considered to be low ITs and ITs of 3 or higher are considered to be high. “N” or “C” denotes excessive necrosis or chlorosis, respectively.
Fig. 1. Infection types produced by races JRCQC, TRTTF, and TTKSK of Puccinia graminis f. sp. tritici on Combination VII (Sr13) and Vernstein (Sr9e).
Plant Disease / May 2012
625
Table 3. Disease reaction of durum wheat (Triticum turgidum subsp. durum) selected for resistant to moderately resistant to Puccinia graminis f. sp. tritici at
the adult stage in field evaluations in Debre Zeit (Ethiopia) and at the seedling stage against races JRCQC, TRTTF, and TTKSK
Seedlingb
Adulta
Line ID
CItr 6519
CItr 7287
CItr 8123
CItr 8214
CItr 8634
CItr 11477
CItr 11541
CItr 13245
CItr 13247
CItr 13333
CItr 13335
CItr 13338
CItr 13768
CItr 14091
CItr 14434
CItr 14965
CItr 15326
CItr 15769
CItr 15814
CItr 15892
CItr 17282
CItr 17283
CItr 17284
CItr 17337
CItr 17637
CItr 17748
CItr 17789
PI 45441
PI 56251
PI 61111
PI 61123
PI 61127
PI 61176
PI 61351
PI 61873
PI 70718
PI 94694
PI 94726
PI 94761
PI 113395
PI 113398
PI 166336
PI 167270
PI 168916
PI 168922
PI 178048
PI 178156
PI 182668
PI 184540
PI 184641
PI 185300
PI 191183
PI 191645
PI 192051
PI 192399
PI 192711
PI 193920
PI 208910
PI 210944
PI 234386
PI 253801
PI 264947
PI 272476
PI 272545
Typec
Origin
Debre Zeit 2009
Cultivar
Cultivar
Landrace
Cultivar
Landrace
Cultivar
Cultivar
Cultivar
Cultivar
Cultivar
Cultivar
Breeding
Cultivar
Cultivated
Landrace
Cultivated
Cultivar
Breeding
Breeding
Cultivar
Cultivar
Cultivar
Cultivar
Cultivar
Landrace
Cultivar
Cultivar
Cultivated
Landrace
Landrace
Landrace
Cultivar
Landrace
Cultivated
Cultivated
Landrace
Landrace
Landrace
Wild
Landrace
Landrace
Landrace
Landrace
Breeding
Breeding
Landrace
Landrace
Cultivated
Cultivated
Landrace
Breeding
Landrace
Cultivated
Landrace
Landrace
Cultivated
Landrace
Landrace
Landrace
Landrace
Landrace
Cultivated
Breeding
Breeding
North Dakota
North Dakota
Ethiopia
North Dakota
Ethiopia
North Dakota
North Dakota
North Dakota
North Dakota
North Dakota
North Dakota
Manitoba
North Dakota
Unknown
Ethiopia
Unknown
North Dakota
North Dakota
North Dakota
North Dakota
North Dakota
North Dakota
North Dakota
Saskatchewan
Ethiopia
North Dakota
North Dakota
South Africa
Portugal
Georgia
Kazakhstan
Kyrgyzstan
Russian Fed.
Hokkaido
Morocco
Iraq
Egypt
Italy
Georgia
Egypt
Egypt
Turkey
Turkey
Mexico
Mexico
Turkey
Turkey
Lebanon
Portugal
Portugal
Santa Fe
Spain
Sao Paulo
Portugal
Italy
Gotland
Portugal
Iraq
Cyprus
Jordan
Iraq
Italy
Hungary
Hungary
10 R
20 MS
40 MR-MS
10 MS-MR
20 MR
20 MS
20 MS
10 R-MR
15 MS
5 R-MR
5R
10 MR-MS
20 MS-MR
5 MR-MS
20 R-MR
10 MR
20 MR
15 MR-MS
T MR-MS
15 MR-MS
5 R-MR
15 MR-R
5 MR
15 MR
30 MS
10 MR
10 R-MR
15 MR-MS
20 MS
20 MS
10 MS
15 MS
15 MS
15 MS
50 MS-MR
20 MS
15 MS
0 / 20 R
TR
10 MR
10 R-MR
15 MR-MS
5 MR
5R
5 MS-MR
5 MS
10 MS
5 MS
10 MS-MR
15 MS
25 MS
15 MS
20 MR-MS
5R
15 MS
5 MS / 40 S
30 MS-MR
30 MS
15 MS-MR
30 MS
30 MS
10 MS
30 MR-MS
30 MS
a
JRCQC (09ETH08-3)
0;
32
13+;
3+ / 3+;N
3+;1
;13
4
;
3+;
2+
2
0; / 2+
3+
3
4;N / ;N
;N3+
;N
;N
;3
;N
;1+
;N / 3
;12
33+ / 2
;1;1+N
32+;
2+
3+3;
2+
34
3+1+;
23+
3-2+
233+
2+;N3
0;
3+ / 0
3+;N
4
2+ / ;N / 0
2+;
3+ / ;
;1+
2+1;
2+
2++
;N3+
2=
2=;
1-;
1;3
23+
2-; / 33+
3-2 / 4
;13+
2+2
2-;
3+1
TRTTF (09ETH061)
4
4
;2-N
2+
4
3
4
22+
;1
2
2-;
0;
2+3- / 22+
4
3+
0;
;2;N
;
;
;2;N
;1N
22;
;N
2+33- / 2
3+
4
4
3
3+
2
3-;
3+
2
4
22+;
3+
3+
3+
22+ / 3
4
3+
3+
2+33+ / 3;N
4
4
3+
2
4
2-;
;1
3+ / 2
3
4
4
2+33-2;
2
4
TTKSK (04KEN156-4)
;CN / 3+
3
2- / 2+2
3+
3+
2
3+
3+
3+
2- / 3+
2;CN / 22-N
X / 3+
333+
22-2
3+
23 / 222222+ / 33+
3+
22
2 / 3+
3+
3+
3+
3+
3+
2 / 3+
3+
22- / 2+32;CN
3-;
3
3
;
2
2
;
;CN
324
2-2
22
2-;N
2+3;CN
2-; / 33
3+
3+
3+
4
23+
(continued on next page)
Plants evaluated for infection response (17) and severity following the modified Cobb scale (13). R = resistant, MR = moderately resistant, MS =
moderately susceptible, S = susceptible, and T = traces.
b Infection types (ITs) observed on seedlings at 14 days post inoculation using a 0-to-4 scale according to Stakman et al. (19), where ITs of 0, ;, 1, 2, or
combinations are considered to be low ITs and ITs of 3 or higher are considered to be high. “N” or “C” denotes excessive necrosis or chlorosis, respectively; /
indicates that an accession was heterogeneous (the predominant type was given first); and – denotes missing data, frequently caused by poor viability of seed.
c Classification according to the United States Department of Agriculture–Agricultural Research Service, National Small Grain Collection (Aberdeen, ID).
Cultivated = uncertainty about the improvement status.
626
Plant Disease / Vol. 96 No. 5
Table 3. (continued from preceding page)
Seedlingb
Adulta
Line ID
PI 272553
PI 274681
PI 278352
PI 278380
PI278503
PI 283854
PI 286539
PI 295967
PI 298547
PI 316092
PI 316096
PI 320128
PI 324928
PI 326315
PI 347217
PI 352317
PI 352463
PI 352512
PI 361149
PI 366110
PI 367224
PI 383416
PI 384111
PI 422412
PI 428539
PI 428541
PI 428549
PI 430747
PI 434919
PI 434952
PI 477881
PI 478298
PI 478304
PI 478306
PI 479916
PI 479921
PI 479923
PI 479956
PI 479959
PI 480006
PI 480401
PI 487290
PI 497927
PI 506469
PI 506470
PI 510694
PI 510696
PI 519170
PI 519171
PI 519445
PI 519559
PI 519619
PI 519639
PI 519642
PI 519811
PI 519832
PI 520299
PI 520300
PI 520392
PI 520413
PI 520518
PI 525395
PI 537310
PI 572862
PI 573005
PI 576787
PI 585010
PI 585020
PI 601250
PI 614658
PI 623997
PI 624854
PI 636501
Typec
Cultivated
Cultivated
Cultivated
Cultivated
Cultivated
Cultivated
Cultivar
Cultivar
Landrace
Breeding
Cultivar
Landrace
Breeding
Cultivar
Landrace
Breeding
Cultivar
Wild
Landrace
Landrace
Breeding
Breeding
Landrace
Cultivar
Cultivar
Cultivar
Cultivar
Landrace
Landrace
Landrace
Landrace
Cultivar
Breeding
Cultivar
Landrace
Landrace
Landrace
Landrace
Landrace
Landrace
Landrace
Landrace
Breeding
Cultivar
Cultivar
Breeding
Cultivar
Breeding
Breeding
Breeding
Breeding
Breeding
Breeding
Breeding
Cultivar
Cultivar
Breeding
Cultivar
Breeding
Breeding
Breeding
Cultivated
Cultivar
Landrace
Cultivar
Landrace
Landrace
Cultivated
Cultivar
Cultivar
Landrace
Landrace
Breeding
Origin
Debre Zeit 2009
Hungary
Poland
Italy
Malta
Spain
India
Ecuador
Israel
Ethiopia
Australia
Australia
Ethiopia
Argentina
Azerbaijan
Iran
Switzerland
Switzerland
Switzerland
India
Egypt
Italy
France
Ethiopia
Australia
France
France
France
Yemen
Egypt
Egypt
Peru
North Dakota
North Dakota
Washington
Ethiopia
Ethiopia
Ethiopia
Ethiopia
Ethiopia
Ethiopia
Ethiopia
Jordan
North Dakota
Colorado
Colorado
North Dakota
North Dakota
La Araucania
La Araucania
North Dakota
Syria
Syria
Syria
Kenya
Italy
Lebanon
North Dakota
California
Mexico
Syria
North Dakota
Morocco
Saskatchewan
Azerbaijan
Arizona
Algeria
Ethiopia
Saudi Arabia
Arizona
United States
Iran
Iran
North Dakota
40 MS-MR
TS
TR
15 MS
10 MS
10 MS
5 MR
15 MS-MR
15 MR
20 MS
15 MS
20 MR-MS
15 MR
TS
60 MS-MR
15 MR
20 MR
5R
10 MR
20 MR
10 R-MR
5 R-MR
15 MR
30 MS
TR
10 MS-MR
TR
40 MS-MR
30 MS
30 MS-MR
10 MR
15 MR-MS
5 MR-MS
5 MS
20 MR-MS
15 MR
20 MR-R
15 MR-R
40 MR-MS
20 R-MR
10 MS-MR
15 MS
5 MR
TR
5 MR-MS
10 MR-MS
5 MR-MS
10 MS
5 MR
TR
5 MS
5 MS
5 MS
5 MS
10 MS
15 MR
5 MS
5 MR-MS
15 MS
10 MR-R
5 R-MR
15 MS
10 MR
20 MR-MS
10 MR-MS
25 MS
50 MS-MR
20 MS
15 R-MR
30 MS
20 MS
15 MS-MR
15 MS-MR
JRCQC (09ETH08-3)
;N / 3
;
1+13;N4
31
4;
;1
3+
;N
23
;2=
1;
31;
2;1
3+
3
3+
1
0;
3-2+
;1
0;
0;
2-;
3-3
2-; / 3
3+
33+
;N
3+/ 22+ /;N
2+
2-;
;N
;2= / 22- / 3
2=;
;N1
;1
3+
31
;3+1
;11+
;N
3;
;1+
22+
;N1+
4
3+
4
3+;
;N
23+
2
3+2
;N1
3+3
2+
32
2+2
3+
3+;N
3-2+
1;N
3+
3+
4
1+;
TRTTF (09ETH061)
X
2
;1
1+
4
2
23-;
;1
23+
;
2+33+
4
22
2+
;N1
4
2;
2
22
;
3-2;
;1
22+
3+
3+
3-2+
;N
;N
;N
2-N
2-N
2-;N
;N2;N2;N234
0;
;
0;
;N
;N
X2
;N1
2-;
22223+ / 23;N
;N
22+
;
3+
;1
2
2
4
222+
2
;
3+
X;
TTKSK (04KEN156-4)
23-c
2+33
23+
22+
3
2=
23
2- / 2
3
3+
2 / 3+
2332+
233+
3-2+
2++
222-;
3-3
223
3+
3+3
2- / 3+
222- / 3
22-2
2-2
2-N
222+ / 23+
2-;
23+ / 2-;
22;33-2+
22-;
22-;N
23
222-;
22+
3
3
23-2+
2-N
22+
22-N; / 2+
3
3
3- / 2-
Plant Disease / May 2012
627
it is virulent to Sr36, SrTmp and the 1A.1R translocation that are
effective against race TTKSK (Tables 1 and 2). Additional studies
are needed to determine the percentage of bread wheat cultivars
and breeding lines resistant to race TRTTF.
Stem rust isolates with virulence to Sr9e and Sr13 were first reported in Ethiopia in 1988 and 1989, respectively (5). They appear
to be widespread, because Admassu et al. (2) described races with
virulence to these two genes in the major wheat-growing regions in
Ethiopia. Races JRCQC and TRTTF, described in this report, possess combined virulence on Sr13 and Sr9e. This virulence combination may explain why the TTKSK-resistant durum entries in
Njoro (Kenya) were susceptible in Debre Zeit (Ethiopia). Lines
with Sr13 conferred a moderately resistant to moderately susceptible response when tested against race TTKSK in the Njoro nursery
(8). However, lines and cultivars carrying Sr9e (Vernal,
K253/3*Steinwedel/8*LMPG, Vernstein) and Sr13 (Khapstein/9*LMPG) exhibited a susceptible response in the Debre Zeit
field (data not shown). The virulence combination to Sr9e and
Sr13 is of particular concern because these two genes constitute
major components of stem rust resistance in North American durum cultivars (11). Identification of novel resistance genes effective
against races JRCQC, TRTTF, and TTKS is required to broaden
the pool of resistance genes in durum wheat. The description of
race TRTTF with virulence to several TTKSK-effective resistance
genes should remind breeders and pathologists of the danger of
deploying race-specific genes alone. Resistance gene combinations
are necessary to provide long-lasting resistance to wheat stem rust.
A set of durum germplasm (137 entries) selected for resistant to
moderately susceptible responses from the 2009 field nursery in
Debre Zeit was evaluated for reaction to races JRCQC, TRTTF,
and TTKSK at the seedling stage (Table 3). The numbers of accessions exhibiting low ITs to race JRCQC, TRTTF, and TTKSK were
96 (70%), 89 (65%), and 84 (61%), respectively. Many of these
lines appear to have race-specific genes and only 47 (34%) accessions were resistant to all three races used in this study. These
resistant lines could serve as sources of stem rust resistance for
wheat-breeding programs. The genetics of resistance to races
JRCQC and TRTTF in selected lines are being investigated.
Twenty-six lines (19%) that were resistant to moderately resistant
in the field were susceptible to the three races at the seedling stage,
suggesting that adult plant resistance might be present in these
accessions. Most of the accessions (66%) susceptible at the seedling stage were landraces and other cultivated materials (with
uncertainty about the improvement status) from the Middle East
and Caucasus regions, and landraces from North and East Africa
(Table 3).
Race-typing experiments of isolates collected from Kenyan
fields in recent years yielded only races belonging to the TTKS
lineage (9,10,22). However, surveys conducted in Ethiopia in the
last 20 years had more diversity of P. graminis f. sp. tritici races
(1,2,20). Continuous and thorough race surveys in Ethiopia are
required to have a clear picture of the virulence dynamics in the
population of P. graminis f. sp. tritici in the country. Identifying
and monitoring movement of races with virulence to effective and
widely used resistance genes is critical for defining breeding strategies for stem rust resistance in durum and bread wheat. Our results
highlight the relevance of evaluating durum wheat lines for stem
rust resistance in Ethiopia due to the presence of combined virulence to genes Sr9e and Sr13 in the P. graminis f. sp. tritici population.
Acknowledgments
This research is funded by the United States Department of Agriculture–Agricultural Research Service and the Durable Rust Resistance of Wheat, Cornell.
628
Plant Disease / Vol. 96 No. 5
We thank L. Wanschura, S. Gale, C. Kebede, and B. Hibdo for their technical
assistance.
Literature Cited
1. Admassu, B., and Emebet, F. 2005. Physiological races and virulence diversity of Puccinia graminis f. sp. tritici on wheat in Ethiopia. Phytopathol.
Mediterr. 44:313-318.
2. Admassu, B., Lind, V., Friedt, W., and Ordon, F. 2009. Virulence analysis of
Puccinia graminis f. sp. tritici populations in Ethiopia with special consideration of Ug99. Plant Pathol. 58:362-369.
3. Anugrahwati, D. R., Shepherd, K. W., Verlin, D. C., Zhang, P., Mirzaghaderi, G., Alker, E., Francki, M. G., and Dundas, I. S. 2008. Isolation
of wheat-rye 1RS recombinants that break the linkage between the stem rust
resistance gene SrR and secalin. Genome 51:341-349.
4. Fetch Jr., T. 2009. Stem rust—a wheat killer of global proportions. Can. J.
Plant Pathol. 31:149.
5. Hulluka, M., Woldeab, G., Adnew, Y., Desta, R., and Badebo, A. 1991.
Wheat pathology research in Ethiopia. Pages 173-218 in: Wheat Research
in Ethiopia: A Historical Perspective. H. Gebre-Mariam, D. G. Tanner, and
M. Hulluka, eds. IAR/CIMMYT, Addis Ababa, Ethiopia.
6. Iqbal, M. J., Ahmad, I., Khanzada, K. A., Ahmad, N., Rattu, A. R., Fayyaz,
M., Ahmad, Y., Hakro, A. A., and Kazi, A. M. 2010. Local stem rust virulence in Pakistan and future breeding strategies. Pak. J. Bot. 43:1999-2009.
7. Jin, Y., and Singh, R. P. 2006. Resistance in U.S. wheat to recent eastern
African isolates of Puccinia graminis f. sp. tritici with virulence to resistance genes Sr31. Plant Dis. 90:476-480.
8. Jin, Y., Singh, R. P., Ward, R. W., Wanyera, R., Kinyua, M., Njau, P., Fetch,
T., Pretorius, Z. A., and Yahyaoui, A. 2007. Characterization of seedling infection types and adult plant infection responses of monogenic Sr gene lines
to race TTKS of Puccinia graminis f. sp. tritici. Plant Dis. 91:1096-1099.
9. Jin, Y., Szabo, L. J., Pretorius, Z. A., Singh, R. P., Ward, R., and Fetch, T.,
Jr. 2008. Detection of virulence to resistance gene Sr24 within race TTKS
of Puccinia graminis f. sp. tritici. Plant Dis. 92:923-926.
10. Jin, Y., Szabo, L. J., Rouse, M., Fetch, T., Jr., Pretorius, Z. A., Wanyera, R.,
and Njau, P. 2009. Detection of virulence to resistance gene Sr36 within the
TTKS race lineage of Puccinia graminis f. sp. tritici. Plant Dis. 93:367-370.
11. Klindworth, D. L., Miller, J. D., Jin, Y., and Xu, S. S. 2007. Chromosomal
locations of genes for stem rust resistance in monogenic lines derived from
tetraploid wheat accession ST464. Crop Sci. 47:1441-1450.
12. Mago, R., Spielmeyer, W., Lawrence, G. J., Lagudah, E. S., Ellis, J. G., and
Pryor, A. 2002. Identification and mapping of molecular markers linked to
rust resistance genes located on chromosome 1RS of rye using wheat-rye
translocation lines. Theor. Appl. Genet. 104:1317-1324.
13. Peterson, R. F., Campbell, A. B., and Hannah, A. E. 1948. A diagrammatic
scale for estimating rust intensity of leaves and stem of cereals. Can. J. Res.
Sect. C 26:496-500.
14. Pozniak, C. J., Reimer, S., Fetch, T., Clarke, J. M., Clarke, F. R., Somers,
D., Knox, R. E., and Singh, A. K. 2008. Association mapping of UG99
resistance in a diverse durum wheat population. Pages 485-487 in: Proc.
11th Int. Wheat Genet. Symp. R. Appels, R. Eastwood, E. Lagudah, P. Langridge, M. Mackay, L. McIntye, and P. Sharp, eds. Sydney University Press,
Sydney, Australia.
15. Roelfs, A. P., Long, D. L., and Roberts, J. J. 1993. Races of Puccinia
graminis in the United States during 1992. Plant Dis. 77:1122-1125.
16. Roelfs, A. P., and Martens, J. W. 1988. An international system of nomenclature for Puccinia graminis f. sp. tritici. Phytopathology 78:526-533.
17. Roelfs, A. P. Singh, R. P., and Saari, E. E. 1992. Rust Diseases of Wheat,
Concepts and Methods of Disease Management. CIMMYT, Mexico.
18. Singh, R. P., Hodson, D. P., Huerta-Espino, J., Jin, Y., Bhavani, S., Njau, P.,
Herrera-Foessel, S. A., P. Singh, P., Singh, S., and Govindan, V. 2011. The
emergence of Ug99 races of the stem rust fungus is a threat to world wheat
production. Annu. Rev. Phytopathol. 49:465-481.
19. Stakman, E. C., Steward, D. M., and Loegering, W. Q. 1962. Identification
and physiologic races of Puccinia graminis var. tritici. U. S. Dep. Agric.
ARS E-617.
20. van Ginkel, M. G., Getnet, G., and Tessema, T. 1989. Stripe, stem and leaf
rust races in major wheat producing areas in Ethiopia. IAR Newsl. Agric.
Res. 3:6-8.
21. Visser, B., Herselman, L., Park, R. F., Karaoglu, H., Bender, C. M., and
Pretorius, Z. A. 2011. Characterization of two new Puccinia graminis f. sp.
tritici races within the Ug99 lineage in South Africa. Euphytica 179:119-127.
22. Wanyera, R., Kinyua, M. G., Jin, Y., and Singh, R. P. 2006. The spread of
stem rust caused by Puccinia graminis f. sp. tritici, with virulence on Sr31
in wheat in Eastern Africa. Plant Dis. 90:113.
23. Zadoks, J. C., Chang, T. T., and Konzak, C. F. 1974. A decimal code for the
growth stage of cereals. Weed Res. 14:415-421.